BrainStars (B*)

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BrainStars: 1415943_at: Sdc1

Affymetrix Probe set ID 1415943_at
Gene Name syndecan 1
Gene Symbol Sdc1 AA408134 AA409076 CD138 Sstn Synd Synd1 syn-1

BrainStars Expression at 51 brain regions

Expression graph Expression map
PDF files: Expression Graph, Expression Map

BrainStars classification of 48 brain regions by multi-state gene analysis

# States 3
Score -21.2251471405662
Multi-state expression graph Multi-state expression histogram Multi-state expression map
PDF files: Expression Graph, Expression Histogram, Expression Map

Other brain expression resources

Cross section images

ViBrism ABA expression energy
ViBrism ABA expression energy
The ViBrism cross section images (whole brain mode: beta version) were provided by the ViBrism team. A full 3-D model of the expression is available at their ViBrism site.
The ABA expression energy cross section images were obtained from the Allen Mouse Brain Atlas, Allen Instiute for Brain Science © 2008. Please refer to their original terms of use.

Links to other resources

Allen Brain Atlas Sdc1
ViBrism Sdc1
EMAGE Sdc1

BrainStars 1-D expression files

You can download BrainStars expression data in a table.
TSV format file BrainStars expression in a tab-separated values format
CSV format file BrainStars expression in a camma-separated values format

BrainStars 3-D expression files

You can download this entry's BrainStars expression data putting on 3-D mouse brain models.
VCAT format file BrainStars expression putting on a brain model.
The file can be viewed with a software, VCAT, downloadable from VCAD@RIKEN site.
XPR format file BrainStars expression putting on a Allen Reference Atlas brain model.
You can view the XPR file with the Brain Explorer software provided by the Allen Institute.

External links

Entrez GeneID 20969
MGI ID MGI:1349162
Ensembl ENSMUSG00000020592
UniGene ID Mm.2580
RefSeq Transcript NM_011519
RefSeq Protein NP_035649
Agilent ID A_52_P479269
Allen Brain Atlas Sdc1
ViBrism Sdc1
EMAGE Sdc1
Copyright © 2009 RIKEN Center for developmental Biology.