BrainStars (B*)

search:

BrainStars: 1422167_at: Sema5a

Affymetrix Probe set ID 1422167_at
Gene Name sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
Gene Symbol Sema5a 5930434A13 Semaf semF 9130201M22Rik AI464145

BrainStars Expression at 51 brain regions

Expression graph Expression map
PDF files: Expression Graph, Expression Map

BrainStars classification of 48 brain regions by multi-state gene analysis

# States 3
Score -46.1532078738444
Multi-state expression graph Multi-state expression map
PDF files: Expression Graph, Expression Map

Other brain expression resources

Cross section images

ViBrism ABA expression energy
ViBrism ABA expression energy
The ViBrism cross section images (whole brain mode: beta version) were provided by the ViBrism team. A full 3-D model of the expression is available at their ViBrism site.
The ABA expression energy cross section images were obtained from the Allen Mouse Brain Atlas, Allen Instiute for Brain Science © 2008. Please refer to their original terms of use.

Links to other resources

Allen Brain Atlas Sema5a
ViBrism Sema5a
EMAGE Sema5a

BrainStars 1-D expression files

You can download BrainStars expression data in a table.
TSV format file BrainStars expression in a tab-separated values format
CSV format file BrainStars expression in a camma-separated values format

BrainStars 3-D expression files

You can download this entry's BrainStars expression data putting on 3-D mouse brain models.
VCAT format file BrainStars expression putting on a brain model.
The file can be viewed with a software, VCAT, downloadable from VCAD@RIKEN site.
XPR format file BrainStars expression putting on a Allen Reference Atlas brain model.
You can view the XPR file with the Brain Explorer software provided by the Allen Institute.

External links

Entrez GeneID 20356
MGI ID MGI:107556
Ensembl ENSMUSG00000022231
UniGene ID Mm.260374
RefSeq Transcript NM_009154
RefSeq Protein NP_033180
Agilent ID A_52_P409076 A_52_P465022
Allen Brain Atlas Sema5a
ViBrism Sema5a
EMAGE Sema5a
Copyright © 2009 RIKEN Center for developmental Biology.