BrainStars (B*)

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BrainStars: 1424131_at: Col6a3

Affymetrix Probe set ID 1424131_at
Gene Name collagen, type VI, alpha 3
Gene Symbol Col6a3 Col6a-3 AI507288

BrainStars Expression at 51 brain regions

Expression graph Expression map
PDF files: Expression Graph, Expression Map

BrainStars classification of 48 brain regions by multi-state gene analysis

# States 2
Score -28.7357770026209
Multi-state expression graph Multi-state expression map
PDF files: Expression Graph, Expression Map

Other brain expression resources

Cross section images

ViBrism ABA expression energy
ViBrism ABA expression energy
The ViBrism cross section images (whole brain mode: beta version) were provided by the ViBrism team. A full 3-D model of the expression is available at their ViBrism site.
The ABA expression energy cross section images were obtained from the Allen Mouse Brain Atlas, Allen Instiute for Brain Science © 2008. Please refer to their original terms of use.

Links to other resources

Allen Brain Atlas Col6a3
ViBrism Col6a3
EMAGE (Col6a3)

BrainStars 1-D expression files

You can download BrainStars expression data in a table.
TSV format file BrainStars expression in a tab-separated values format
CSV format file BrainStars expression in a camma-separated values format

BrainStars 3-D expression files

You can download this entry's BrainStars expression data putting on 3-D mouse brain models.
VCAT format file BrainStars expression putting on a brain model.
The file can be viewed with a software, VCAT, downloadable from VCAD@RIKEN site.
XPR format file BrainStars expression putting on a Allen Reference Atlas brain model.
You can view the XPR file with the Brain Explorer software provided by the Allen Institute.

External links

Entrez GeneID 12835
MGI ID MGI:88461
Ensembl ENSMUSG00000048126
UniGene ID Mm.7562
RefSeq Transcript XM_003085326 XM_003086176 XM_003086177 XM_003086178 XM_003086179 XM_003086180
RefSeq Protein XP_003085374 XP_003086224 XP_003086225 XP_003086226 XP_003086227 XP_003086228
Agilent ID A_52_P479262 A_52_P573586 A_52_P675592
Allen Brain Atlas Col6a3
ViBrism Col6a3
EMAGE (Col6a3)
Copyright © 2009 RIKEN Center for developmental Biology.