BrainStars (B*)

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BrainStars: 1434776_at: Sema5a

Affymetrix Probe set ID 1434776_at
Gene Name sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
Gene Symbol Sema5a 5930434A13 Semaf semF 9130201M22Rik AI464145

BrainStars Expression at 51 brain regions

Expression graph Expression map
PDF files: Expression Graph, Expression Map

BrainStars classification of 48 brain regions by multi-state gene analysis

# States 1
Score -86.3096228059084
Multi-state expression graph Multi-state expression map
PDF files: Expression Graph, Expression Map

Other brain expression resources

Cross section images

ViBrism ABA expression energy
ViBrism ABA expression energy
The ViBrism cross section images (whole brain mode: beta version) were provided by the ViBrism team. A full 3-D model of the expression is available at their ViBrism site.
The ABA expression energy cross section images were obtained from the Allen Mouse Brain Atlas, Allen Instiute for Brain Science © 2008. Please refer to their original terms of use.

Links to other resources

Allen Brain Atlas Sema5a
ViBrism Sema5a
EMAGE Sema5a

BrainStars 1-D expression files

You can download BrainStars expression data in a table.
TSV format file BrainStars expression in a tab-separated values format
CSV format file BrainStars expression in a camma-separated values format

BrainStars 3-D expression files

You can download this entry's BrainStars expression data putting on 3-D mouse brain models.
VCAT format file BrainStars expression putting on a brain model.
The file can be viewed with a software, VCAT, downloadable from VCAD@RIKEN site.
XPR format file BrainStars expression putting on a Allen Reference Atlas brain model.
You can view the XPR file with the Brain Explorer software provided by the Allen Institute.

External links

Entrez GeneID 20356
Ensembl ENSMUSG00000022231
UniGene ID Mm.260374
RefSeq Transcript NM_009154
RefSeq Protein NP_033180
Agilent ID A_52_P409076 A_52_P465022
Allen Brain Atlas Sema5a
ViBrism Sema5a
EMAGE Sema5a
Copyright © 2009 RIKEN Center for developmental Biology.