BrainStars (B*)

search:

BrainStars: 1439463_x_at: Hmgb1

Affymetrix Probe set ID 1439463_x_at
Gene Name high mobility group box 1
high-mobility group (nonhistone chromosomal) protein 1-like 1
predicted gene 2710
Gene Symbol Hmgb1 DEF HMG-1 Hmg1 Hmg1l1 SBP-1 amphoterin p30 EG434174 Gm2710

BrainStars Expression at 51 brain regions

Expression graph Expression map
PDF files: Expression Graph, Expression Map

BrainStars classification of 48 brain regions by multi-state gene analysis

# States 2
Score -43.7155603576202
Multi-state expression graph Multi-state expression map
PDF files: Expression Graph, Expression Map

Other brain expression resources

Cross section images

ViBrism
ViBrism
The ViBrism cross section images (whole brain mode: beta version) were provided by the ViBrism team. A full 3-D model of the expression is available at their ViBrism site.

Links to other resources

ViBrism Tbl1xr1
EMAGE Hmgb1

BrainStars 1-D expression files

You can download BrainStars expression data in a table.
TSV format file BrainStars expression in a tab-separated values format
CSV format file BrainStars expression in a camma-separated values format

BrainStars 3-D expression files

You can download this entry's BrainStars expression data putting on 3-D mouse brain models.
VCAT format file BrainStars expression putting on a brain model.
The file can be viewed with a software, VCAT, downloadable from VCAD@RIKEN site.
XPR format file BrainStars expression putting on a Allen Reference Atlas brain model.
You can view the XPR file with the Brain Explorer software provided by the Allen Institute.

External links

Entrez GeneID 15289 434174 100040320
MGI ID MGI:96113 96113 96113
Ensembl ENSMUSG00000060128 ENSMUSG00000066530 ENSMUSG00000066551 ENSMUSG00000081455 ENSMUSG00000081622 ENSMUSG00000081738 ENSMUSG00000082585 ENSMUSG00000083822 ENSMUSG00000084129
UniGene ID Mm.359408
RefSeq Transcript NM_001111282 NM_010439 XR_031779 XR_108238
RefSeq Protein NP_001104752 NP_034569
Agilent ID A_52_P432170
ViBrism Tbl1xr1
EMAGE Hmgb1
Copyright © 2009 RIKEN Center for developmental Biology.