BrainStars (B*)

search:

BrainStars: 1439889_at: Scn8a

Affymetrix Probe set ID 1439889_at
Gene Name sodium channel, voltage-gated, type VIII, alpha
Gene Symbol Scn8a NaCh6 Nav1.6 dmu med mnd-2 mnd2 nmf2 nmf335 nmf58 nur14 seal C630029C19Rik AI853486

BrainStars Expression at 51 brain regions

Expression graph Expression map
PDF files: Expression Graph, Expression Map

BrainStars classification of 48 brain regions by multi-state gene analysis

# States 1
Score -72.6617467170563
Multi-state expression graph Multi-state expression map
PDF files: Expression Graph, Expression Map

Other brain expression resources

Cross section images

ViBrism ABA expression energy
ViBrism ABA expression energy
The ViBrism cross section images (whole brain mode: beta version) were provided by the ViBrism team. A full 3-D model of the expression is available at their ViBrism site.
The ABA expression energy cross section images were obtained from the Allen Mouse Brain Atlas, Allen Instiute for Brain Science © 2008. Please refer to their original terms of use.

Links to other resources

Allen Brain Atlas Scn8a
ViBrism Scn8a
EMAGE Scn8a

BrainStars 1-D expression files

You can download BrainStars expression data in a table.
TSV format file BrainStars expression in a tab-separated values format
CSV format file BrainStars expression in a camma-separated values format

BrainStars 3-D expression files

You can download this entry's BrainStars expression data putting on 3-D mouse brain models.
VCAT format file BrainStars expression putting on a brain model.
The file can be viewed with a software, VCAT, downloadable from VCAD@RIKEN site.
XPR format file BrainStars expression putting on a Allen Reference Atlas brain model.
You can view the XPR file with the Brain Explorer software provided by the Allen Institute.

External links

Entrez GeneID 20273
Ensembl ENSMUSG00000023033
UniGene ID Mm.385012
RefSeq Transcript NM_001077499 NM_011323
RefSeq Protein NP_001070967 NP_035453
Agilent ID A_51_P125695 A_52_P183239
Allen Brain Atlas Scn8a
ViBrism Scn8a
EMAGE Scn8a
Copyright © 2009 RIKEN Center for developmental Biology.