BrainStars (B*)

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BrainStars: 1455627_at: Col8a1

Affymetrix Probe set ID 1455627_at
Gene Name collagen, type VIII, alpha 1
Gene Symbol Col8a1 Col8a-1

BrainStars Expression at 51 brain regions

Expression graph Expression map
PDF files: Expression Graph, Expression Map

BrainStars classification of 48 brain regions by multi-state gene analysis

# States 2
Score -22.2179882382324
Multi-state expression graph Multi-state expression histogram Multi-state expression map
PDF files: Expression Graph, Expression Histogram, Expression Map

Other brain expression resources

Cross section images

ViBrism ABA expression energy
ViBrism ABA expression energy
The ViBrism cross section images (whole brain mode: beta version) were provided by the ViBrism team. A full 3-D model of the expression is available at their ViBrism site.
The ABA expression energy cross section images were obtained from the Allen Mouse Brain Atlas, Allen Instiute for Brain Science © 2008. Please refer to their original terms of use.

Links to other resources

Allen Brain Atlas Col8a1
ViBrism Col8a1
EMAGE Col8a1

BrainStars 1-D expression files

You can download BrainStars expression data in a table.
TSV format file BrainStars expression in a tab-separated values format
CSV format file BrainStars expression in a camma-separated values format

BrainStars 3-D expression files

You can download this entry's BrainStars expression data putting on 3-D mouse brain models.
VCAT format file BrainStars expression putting on a brain model.
The file can be viewed with a software, VCAT, downloadable from VCAD@RIKEN site.
XPR format file BrainStars expression putting on a Allen Reference Atlas brain model.
You can view the XPR file with the Brain Explorer software provided by the Allen Institute.

External links

Entrez GeneID 12837
Ensembl ENSMUSG00000068196
UniGene ID Mm.130388
RefSeq Transcript NM_007739
RefSeq Protein NP_031765
Agilent ID A_52_P282058 A_52_P292792
Allen Brain Atlas Col8a1
ViBrism Col8a1
EMAGE Col8a1
Copyright © 2009 RIKEN Center for developmental Biology.