BrainStars (B*)

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BrainStars marker genes (DG:high)

Genes whose levels in a specific CNS region are higher or lower than in others. (Help)
High regions Low regions
LS RS Cx motor Cx cingulate OB anterior OB posterior Pir Tu ventral S CA1 CA2/CA3 DG A posterior GP CPu lateral CPu medial MD VA/VL LG MG Hb M ME SCN MPA SO SPa ventral SPa dorsal DM VMH Arc PAG SC IC VTA SN Tg Pn MVe Cb vermis Cb lobe Cb nucleus spinal cord anterior spinal cord posterior
1 - 25 of 116 entries
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Probe set ID Symbol Name Fold Change Gene Category [desc]
1 1434655_at [new page][PP page] Foxk1 forkhead box K1 2.08816 TF Fox
2 1425413_at [new page][PP page] Rfx3 regulatory factor X, 3 (influences HLA class II expression) 2.69714 TF
3 1421520_at [new page][PP page] Jph1 junctophilin 1 1.86465 SP
4 1455876_at [new page][PP page] Slc4a7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 2.64024 SLC
5 1448950_at [new page][PP page] Il1r1 interleukin 1 receptor, type I 2.70161 NH/NT
6 1450803_at [new page][PP page] Ntf3 neurotrophin 3 3.14416 Ng NH/NT
7 1422167_at [new page][PP page] Sema5a sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 3.61537 Ng AG
8 1421336_at [new page][PP page] Prox1 prospero-related homeobox 1 11.3473 Hox
9 1437894_at [new page][PP page] Prox1 prospero-related homeobox 1 11.477 Hox
10 1457432_at [new page][PP page] Prox1 prospero-related homeobox 1 6.57302 Hox
11 1415935_at [new page][PP page] Smoc2 SPARC related modular calcium binding 2 11.0171 EM
12 1431362_a_at [new page][PP page] Smoc2 SPARC related modular calcium binding 2 7.56723 EM
13 1436514_at [new page][PP page] Gpc4 glypican 4 3.71385 EM
14 1437568_at [new page][PP page] Mmp16 matrix metallopeptidase 16 2.58421 EM
15 1443412_s_at [new page][PP page] Mmp16 matrix metallopeptidase 16 2.61176 EM
16 1425044_at [new page][PP page] Kcnj6 potassium inwardly-rectifying channel, subfamily J, member 6 2.01738 Ch
17 1425707_a_at [new page][PP page] Kcnj6 potassium inwardly-rectifying channel, subfamily J, member 6 1.593 Ch
18 1441801_at [new page][PP page] Kctd4 potassium channel tetramerisation domain containing 4 8.37587 Ch
19 1416875_at [new page][PP page] Parvg parvin, gamma 1.71163 CA
20 1434769_at [new page][PP page] Btbd9 BTB (POZ) domain containing 9 1.989 CA
21 1441371_at [new page][PP page] Plxna4 plexin A4 2.49364 AG
22 1457840_at [new page][PP page] Plxna4 plexin A4 2.01487 AG
23 1416251_at [new page][PP page] Mcm6 minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) 1.98361
24 1417236_at [new page][PP page] Ehd3 EH-domain containing 3 2.27499
25 1418476_at [new page][PP page] Crlf1 cytokine receptor-like factor 1 7.52382
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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