BrainStars marker genes (SO:low)

Genes whose levels in a specific CNS region are higher or lower than in others. (Help)

LS Cx motor OB posterior Pir Tu ventral S CA1 CA2/CA3 DG A posterior CPu lateral CPu medial MD VA/VL Hb ME SCN SO SPa ventral SPa dorsal DM VMH Arc PAG VTA Tg Pn Cb lobe spinal cord anterior

1 - 25 of 137 entries

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	Probe set ID	Symbol	Name	Fold Change	Gene Category
1	1427898_at	Rnf6	ring finger protein (C3H2C3 type) 6	1.87074	TF Ng
2	1427899_at	Rnf6	ring finger protein (C3H2C3 type) 6	2.06817	TF Ng
3	1417632_at	Atp6v0a1	ATPase, H+ transporting, lysosomal V0 subunit A1	2.02094	TF
4	1423641_s_at	Cnot7	CCR4-NOT transcription complex, subunit 7	1.82377	TF
5	1429839_a_at	Yaf2	YY1 associated factor 2	1.77903	TF
6	1434434_s_at	Tcerg1	transcription elongation regulator 1 (CA150)	1.9829	TF
7	1435775_at	Clock	circadian locomoter output cycles kaput	1.97751	TF
8	1423651_at	Isca1	iron-sulfur cluster assembly 1 homolog (S. cerevisiae)	1.53459	SP
9	1433467_at	Slc7a6	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	1.4116	SLC
10	1451674_at	Slc12a5	solute carrier family 12, member 5	2.42494	SLC
11	1427207_s_at	Afg3l2	AFG3(ATPase family gene 3)-like 2 (yeast)	1.48932	Ng
12	1452872_at	Ank3	ankyrin 3, epithelial	2.22057	Ng
13	1454740_at	Mib1	mindbomb homolog 1 (Drosophila)	1.70083	Ng
14	1436042_at	Tln1	talin 1	2.14694	CA SP
15	1430583_at	Nrcam	neuron-glia-CAM-related cell adhesion molecule	2.2231	CA Ng AG
16	1424341_s_at	Pcdha1	protocadherin alpha 1	2.36642	CA
17	1435807_at	Cdc42	cell division cycle 42 homolog (S. cerevisiae)	2.2127	CA
18	1451783_a_at	Kifap3	kinesin-associated protein 3	2.40451	CA
19	1452981_at	Cntn1	contactin 1	1.96691	CA
20	1415685_at	Mtif2	mitochondrial translational initiation factor 2	2.01954
21	1416692_at	Coil	coilin	1.51639
22	1416951_a_at	Atp6v1d	ATPase, H+ transporting, lysosomal V1 subunit D	1.85109
23	1416952_at	Atp6v1d	ATPase, H+ transporting, lysosomal V1 subunit D	1.74257
24	1416991_at	Mto1	mitochondrial translation optimization 1 homolog (S. cerevisiae)	1.52808
25	1417134_at	Srpk2	serine/arginine-rich protein specific kinase 2	1.80497

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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead

BrainStars (B*)

BrainStars marker genes (SO:low)